Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs11726728 chr4:5544572 C/T 5.9E-5 280 25.6 27.2 12.93 KM Plot
KIRP rs117268614 chr10:43160954 G/A 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs11751286 chr6:26241361 C/G 3.4E-6 284 25.7 26.13 17.13 KM Plot
KIRP rs11753825 chr6:2430888 A/T 4.62E-5 289 26 25.22 20.73 KM Plot
KIRP rs11761598 chr7:20679471 A/G 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs117658001 chr6:148658778 G/A 9.73E-5 286 26.4 18.07 18.2 KM Plot
KIRP rs117664042 chr21:44247886 G/C 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs117691393 chr19:39305445 A/G 6.83E-6 278 25.02 39.6 10.97 KM Plot
KIRP rs11772341 chr7:20680322 T/C 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs11773053 chr7:20680353 T/C 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs11773775 chr7:20665487 G/A 7.48E-6 284 26.28 22.57 11.2 KM Plot
KIRP rs117881821 chr19:39304962 C/A 6.44E-6 278 24.8 39.57 10.97 KM Plot
KIRP rs11799415 chr1:58992677 C/T 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs11799786 chr1:58993292 C/G 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs11801317 chr1:26610030 C/T 2.45E-6 286 25.62 29.77 14.38 KM Plot